Table 2 Characteristics of TGC-05, TGC-02 and the transconjugants genome components
Strains | MLST | Chromosome or plasmid | Size (bp) | Plasmid type | AMR genes |
|---|---|---|---|---|---|
TGC-05 | 273 | Chromosome | 5,279,365 | – | CRP, emrR, oqxB, oqxA, acrD, baeR, mdtC, mdtB, H-NS, marA, SHV-11, msbA, ramA, acrA, acrB, FosA6, cpxA |
pTGC-05-Tmex | 309,063 | IncFIB/IncHI1B/IncR | aadA2, cmlA1, ANT(3'')-IIa, qacH,sul3, AAC(3)-IV, APH(4)-Ia, APH(6)-Id, APH(3'')-Ib, FosA3, TEM-141, CTX-M-55, APH(3')-Ia, mphE, msrE, armA, sul1, DHA-1, QnrB4, TmexCD1-toprJ1 | ||
pTGC-05-mcr8 | 137,567 | IncFIA/IncFII | MCR-8, floR, tet(A), mphA, QnrB20, sul1, aadA16, dfrA27, arr-3, AAC(6')-Ib-cr | ||
TGC-02 | 656 | Chromosome | 5,212,819 | – | CRP, emrR, oqxB, oqxA, acrD, baeR, mdtC, mdtB, H-NS, marA, SHV-187, msbA, ramA, acrA, acrB, FosA6, cpxA |
pTGC-02-OXA | 246,588 | IncFIB/IncHI1B | mphE, msrE, armA, sul1, arr-3, catB3, OXA-1, AAC(6')-Ib-cr, CTX-M-55 | ||
pTGC-02-Tmex | 207,447 | IncFIB/IncFII | qacH, sul3, AAC(3)-IV, APH(4)-Ia, APH(6)-Id, APH(3'')-Ib, TmexCD1-toprJ1 | ||
pTGC-02-mcr8 | 146,089 | IncFII | MCR-8, sul2, APH(3'')-Ib, APH(6)-Id, APH(3')-Ia, AAC(3)-IId, AAC(6')-Ib-cr, arr-3, dfrA27, aadA16, sul1, QnrB20, mphA, tet(A), floR | ||
JTGC-02-2-Tmex | – | Chromosome | 4,600,459 | – | gadX, gadW, mdtF, mdtE, CRP, acrF, acrE, acrS, bacA, tolC, emrB, emrA, emrR, mphB, acrD, ampC1, evgS, evgA, emrK, emrY, pmrF, yojI, baeR, baeS, mdtC, mdtB, mdtA, Ugd, marA, H-NS, mdtH, mdtG, msbA, mdfA, kdpE, emrE, acrA, acrB, ampH, mdtM, ampC, eptA, mdtN, mdtO, mdtP, cpxA |
pJ-TGC-02–1 | 165,182 | IncFII_1 | MCR-8, sul2, APH(3'')-Ib, APH(6)-Id, APH(3')-Ia, AAC(3)-IId, AAC(6')-Ib-cr, arr-3, dfrA27, aadA16, QnrB20, sul1, mphA, TmexCD1-toprJ1 | ||
pJ-TGC-02–2 | 188,350 | IncFIB/IncFII | qacH, sul3, AAC(3)-IV, APH(4)-Ia, tet(A), floR |