Table 1 Characteristics of S. agalactiae in different CCs
From: A Facile machine learning multi-classification model for Streptococcus agalactiae clonal complexes
CC | X2 | p | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 (n = 33) | 10 (n = 40) | 12 (n = 41) | 17 (n = 44) | 19 (n = 76) | 23 (n = 36) | 24 (n = 28) | O (n = 27) | Total (n = 325) | |||||
Antitibiotic resistance | ERY | I | 0 | 0 | 6 | 5 | 16 | 0 | 1 | 0 | 28 | 102.620 | 0.000 * |
R | 21 | 36 | 33 | 34 | 41 | 12 | 7 | 17 | 201 | ||||
S | 12 | 4 | 2 | 5 | 19 | 24 | 20 | 10 | 96 | ||||
CLI | I | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 104.514 | 0.000 * | |
R | 22 | 35 | 40 | 33 | 48 | 7 | 3 | 18 | 206 | ||||
S | 11 | 5 | 1 | 10 | 28 | 29 | 25 | 9 | 118 | ||||
LVX | I | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 4 | 226.202 | 0.000 * | |
R | 2 | 38 | 0 | 0 | 57 | 2 | 0 | 4 | 103 | ||||
S | 30 | 2 | 41 | 44 | 18 | 32 | 28 | 23 | 218 | ||||
TCY | I | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 3 | 192.377 | 0.000 * | |
R | 25 | 3 | 41 | 44 | 69 | 34 | 26 | 21 | 263 | ||||
S | 8 | 37 | 0 | 0 | 5 | 1 | 1 | 6 | 58 | ||||
Virulence genes | fbsA | 13 | 34 | 39 | 1 | 7 | 33 | 25 | 9 | 161 | 190.419 | 0.000 | |
scpB | 32 | 40 | 41 | 44 | 75 | 36 | 28 | 11 | 307 | 163.006 | 0.000 | ||
lmb | 32 | 39 | 41 | 43 | 75 | 35 | 28 | 12 | 305 | 125.045 | 0.000 | ||
Gpc1 | 25 | 1 | 34 | 19 | 74 | 0 | 0 | 6 | 159 | 203.944 | 0.000 | ||
Gpc2 | 33 | 38 | 34 | 19 | 74 | 0 | 0 | 10 | 208 | 208.924 | 0.000 | ||
Gpc3 | 33 | 38 | 34 | 19 | 74 | 0 | 0 | 10 | 208 | 208.924 | 0.000 | ||
Gpc4 | 32 | 38 | 34 | 19 | 74 | 0 | 2 | 10 | 209 | 196.167 | 0.000 | ||
Gpc5 | 33 | 38 | 34 | 19 | 74 | 0 | 0 | 10 | 208 | 208.924 | 0.000 | ||
cylK | 0 | 1 | 1 | 0 | 1 | 35 | 27 | 2 | 67 | 283.902 | 0.000 | ||
cfb | 33 | 40 | 41 | 44 | 76 | 36 | 28 | 24 | 322 | 33.420 | 0.000 | ||
spb1 | 23 | 38 | 41 | 0 | 3 | 1 | 0 | 3 | 109 | 255.955 | 0.000 | ||
bac | 0 | 30 | 11 | 1 | 0 | 1 | 1 | 2 | 46 | 157.811 | 0.000 | ||
cpslaJ | 0 | 1 | 0 | 44 | 64 | 31 | 0 | 21 | 161 | 244.783 | 0.000 | ||
cpsG | 7 | 1 | 0 | 44 | 64 | 0 | 1 | 12 | 129 | 223.793 | 0.000 | ||
cpsI | 0 | 0 | 0 | 44 | 64 | 0 | 0 | 10 | 118 | 254.075 | 0.000 | ||
cpsJ | 0 | 0 | 0 | 43 | 62 | 0 | 0 | 10 | 115 | 243.235 | 0.000 | ||
Serotypes | Ia | 0 | 0 | 0 | 0 | 0 | 30 | 0 | 11 | 41 | 838.675 | 0.000 | |
Ib | 0 | 38 | 41 | 0 | 0 | 0 | 0 | 1 | 80 | ||||
II | 0 | 2 | 0 | 0 | 3 | 0 | 0 | 1 | 6 | ||||
III | 1 | 0 | 0 | 44 | 62 | 0 | 0 | 10 | 117 | ||||
IV | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | ||||
V | 19 | 0 | 0 | 0 | 9 | 4 | 28 | 2 | 62 | ||||
VI | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 11 | ||||
VII | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 4 | ||||
ND | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 3 | ||||