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Table 1 Primers used in this study

From: Analysis of integrons and associated gene cassettes in clinical isolates of multidrug resistant Pseudomonas aeruginosafrom Southwest Nigeria

Name

Sequence (5′-3′)

Target region

Expected size (bp)

Reference

hep35 *

TGCGGGTYAARGATBTKGATTT

Int-1,2,3

491

[21]

hep36 *

CARCACATGCGTRTARAT

Int-1,2,3

  

hep58

TCATGGCTTGTTATGACTGT

Cassette arrays in class 1 integrons

Variable

[21]

hep59

GTAGGGCTTATTATGCACGC

Cassette arrays in class 1 integrons

  

intI2L

CACGGATATGCGACAAAAAGGT

Class 2 integron

789

[23]

intI2R

GTAGCAAACGAGTGACGAAATG

Class 2 integron

  

intI3L

GCCTCCGGCAGCGACTTTCAG

Class 3 integron

980

[23]

intI3R

ACGGATCTGCCAAACCTGACT

Class 3 integron

  
  1. *For hep35 and hep36: B = C or G or T, K = G or T, R = A or G and Y = C or T.