Table 2 The Ct value of P. jirovecii qPCR and mNGS sequencing results of 17 cases in this study
Case No. | Sample type | Specific reads of mNGS results (n) | Ct value |
|---|---|---|---|
1 | Blood | Pneumocystis jirovecii (712) | 33.63 |
2 | Blood | Pneumocystis jirovecii (27), Parvovirus B19 (121) | 32.54 |
| Â | BALF | Pneumocystis jirovecii (284), Acinetobacter baumannii (527) | 32.54 |
3 | BALF | Pneumocystis jirovecii (7854) | 31.13 |
4 | BALF | Pneumocystis jirovecii (1104) | 24.48 |
5 | BALF | Pneumocystis jirovecii (367) | 31.13 |
6 | BALF | Pneumocystis jirovecii (5029) | 34.03 |
7 | BALF | Pneumocystis jirovecii (109,593), CMV (42), Aspergillus fumigatus (833), EB (18) | 27.75 |
8 | BALF | Pneumocystis jirovecii (487) | 35.39 |
9 | BALF | Pneumocystis jirovecii (9550), TTV (60), Staphylococcus epidermidis (18) | 31.80 |
10 | BALF | Pneumocystis jirovecii (1435) | 32.71 |
11 | Blood | Pneumocystis jirovecii (79), Streptococcus pneumoniae (27), Escherichia coli (53) | 32.15 |
12 | Blood | Pneumocystis jirovecii (6), Pseudomonas aeruginosa (83), Acinetobacter baumannii (359) | 35.25 |
13 | BALF | Pneumocystis jirovecii (871), parvovirus B19 (62) | 33.12 |
|  | Blood | Pneumocystis jirovecii (187), Parvovirus B19 (161,506) | 35.87 |
14 | BALF | Pneumocystis jirovecii (22,576), Streptococcus pneumoniae (168) | 30.12 |
15 | BALF | Pneumocystis jirovecii (27,969) | 28.00 |
16 | Blood | Pneumocystis jirovecii (3024) | 34.78 |
17 | Blood | Pneumocystis jirovecii (1594), Corynebacterium matruchotii (106), CMV (72) | 32.00 |