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Table 1 RT-PCR targets and their primers for detecting Tropheryma whipplei in this study

From: Prevalence and detection of Tropheryma whipplei in the stools of Korean patients with diarrhea using real-time PCRs

Target

Primer sequence (5′–3′)

Product size, bp

Limit of detection, copies/μL

Tm, °C

Forward

Reverse

16S–23S rRNA ITS

CCGGTGACTTAACCTTTTTGGAGA

TCCCGAGGCTTATCGCAGATTG

489

190

84

rpoB

CTCGGTGTTGATGTTGATCCAA

GCACCGCAACCTCGGAGAAA

109

1830

63

hsp65

CGCGAAAGAGGTTGAGACTG

ACATCTTCAGCAATGATAAGAAGTT

357

26

82

Dig15

TGTTTTGTACTGCTTGTAACAGGATCT

GATGATAGGAGGGATAGAGCAGGA

155

599

74

  1. ITS intergenic spacer, RT-PCR real-time PCR, Tm melting temperature