Table 1 Results of in silico genotyping approaches
Typing scheme | Software/typing tool | Typing result |
|---|---|---|
Phylogenetic group (Clermont type) | EnteroBase | C |
Serotyping | SeroTypeFinder (CGE) / Enterobase | O8:H4 |
Multilocus sequence typing (MLST) | EnteroBase / SeqSphere +  | ST88 (Achtmann scheme) |
Core genome (cg)MLST | EnteroBase | ST173013 |
Core genome (cg)MLST | SeqSphere +  | CT12213 |
Whole genome (wg)MLST | EnteroBase | ST196560 |
Capsule typing | Kleborate | KL54 |