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Table 1 Optimal LAMP primer sets for blaAFM-1

From: Rapid detection of a novel B1-β-lactamase gene, blaAFM-1 using a loop-mediated isothermal amplification (LAMP) assay

Primer

Sequences (5′–3′)

Position& (bp)

F3

TTGGTGAGCAGGTGGATA

95–112

B3

AAGGTCAGGCTGTGCT

479–494

FIP(F1c + F2)

TCATCGGTCCAGGCGGTAGGCAACATACCTCGTTCAT

BIP(B1c + B2)

TCAGACCAGCCAGATCCTCAACCATCTTGTCCTGATGCG

LF

CGCCATCCTTGACGATCA

241–258

LB

CTGGATTAAGCAAGAGATCAATCTG

300–324

  1. &The complete coding sequence of AFM-1 is taken as reference sequences
  2. F3 and B3, outer primers; FIP and BIP, inner primers; LF and BF, loop primers