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Table 2 Overview of observed sequences based on NG-STAR and PubMLST

From: Molecular characterization of a ceftriaxone-resistant Neisseria gonorrhoeae strain found in Switzerland: a case report

Locus

Contig

Allele-type

Length (bp)

Start position

End position

Comments

penAa

penA

148

607

NA

NA

penA type 148 NonMosaic; A517G

NG_ponA

ponA

1

75

218

292

Mutation: L421P

NG_porB

porinB

55

30

116

145

Mutations: G120N, A121G

proNEIS1635

mtr

3

66

146

211

Adenine deletion in promoter

NG_gyrA

gyrA

7

264

121

384

Mutations: S91F, D95A

NG_parC

parC

3

332

1

332

Mutation: S87R

NG_23S

23S rRNA gene

100

567

33

599

Wild type

  1. aAnalysis of penA was performed with Ng Star Allele Query (https://ngstar.canada.ca/alleles/query?lang=en)
  2. All other sequence queries were performed with PubMLST “Sequence query—Neisseria profile/sequence definitions” using “all loci” (https://pubmlst.org/bigsdb?db=pubmlst_neisseria_seqdef&page=sequenceQuery). The sequences were analyzed together, and the results of this analysis are shown in the table
  3. NA no information available