Sample ID | blaOXA-51-like allele | ampC allele | blaOXA-51-like- and ampC-based clusterization | Whole genome sequencing | Multilocus sequence typing | ||
---|---|---|---|---|---|---|---|
ST profileb | ST | CC | |||||
Ab-Pak-Lah-01 | ISAba1, blaOXA-66 | ISAba1, ampC-2 | Individual strain | QQPR00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Lah-02 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-03 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-04 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | SMUA00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Lah-06 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-07 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-08 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | QQPS00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Lah-09 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-10 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-11 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-12 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-13 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-14 | blaOXA-371 | ISAba1, ampC-3 | Ab-Pak-cluster-6A | QQPT00000000.1 | 1, 1, 1, 1, 5, 1, 1 | 1 | 1 |
Ab-Pak-Lah-15 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-16 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Lah-17 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Pesh-01 | blaaOXA-65 | ampC-43 | Ab-Pak-cluster-7 | SMUB00000000.1 | 41, 42, 13, 1, 5, 4, 14 | 158 | 158 |
Ab-Pak-Pesh-02 | blaaOXA-65 | ampC-43 | Ab-Pak-cluster-7 | ND | – | – |  |
Ab-Pak-Pesh-03 | blaOXA-66 | ISAba1, ampC-2 | Ab-Pak-cluster-2 | ND | – | – |  |
Ab-Pak-Pesh-04 | blaOXA-64 | ampC-25 | Individual strain | SMUC00000000.1 | 3, 3, 2, 4, 7, 2, 4 | 25 | 25 |
Ab-Pak-Pesh-05 | blaOXA-371 | ISAba1, ampC-8 | Ab-Pak-cluster-6B | SMUD00000000.1 | 2, 1, 2, 1, 5, 1, 1 | 1106 | 1 |
Ab-Pak-Pesh-06 | blaOXA-66 | ISAba1, ampC-2 | Ab-Pak-cluster-2 | QQPU00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-07 | blaaOXA-65 | ampC-43 | Ab-Pak-cluster-7 | QQPV00000000.1 | 41, 42, 13, 1, 5, 4, 14 | 158 | 158 |
Ab-Pak-Pesh-08 | blaOXA-66 | ISAba1, ampC-2 | Ab-Pak-cluster-2 | ND | – | – |  |
Ab-Pak-Pesh-09 | blaaOXA-65 | ampC-43 | Ab-Pak-cluster-7 | ND | – | – |  |
Ab-Pak-Pesh-10 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | QQPW00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-11 | blaOXA-66 | ISAba1, ampC-2 | Ab-Pak-cluster-2 | SMUE00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-13 | blaOXA-66 | ISAba1, ampC-2 | Ab-Pak-cluster-2 | SMUF00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-14 | blaOXA-69 | ISAba1, ampC-78 | Ab-Pak-cluster-5 | SMUG00000000.1 | 1, 1, 1, 1, 5, 1, 1 | 1 | 1 |
Ab-Pak-Pesh-15 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Pesh-16 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | SMUQ00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-17 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Pesh-18 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Pesh-19 | blaOXA-66 | ISAba1, ampC-2 | Ab-Pak-cluster-2 | ND | – | – |  |
Ab-Pak-Pesh-20 | blaOXA-69 | ampC-1 | Ab-Pak-cluster-4 | QQPX00000000.1 | 1, 1, 1, 1, 5, 1, 1 | 1 | 1 |
Ab-Pak-Pesh-21 | blaOXA-66 | ISAba1, ampC-20 | Ab-Pak-cluster-3 | ND | – | – |  |
Ab-Pak-Pesh-22 | blaOXA-68 | ISAba1, ampC-79 | Individual strain | SMUR00000000.1 | 1, 3, 10, 1, 4, 4, 4 | 23 | 23 |
Ab-Pak-Pesh-23 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Pesh-24 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Pesh-25 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | QQPY00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-26 | blaOXA-371 | ISAba1, ampC-3 | Ab-Pak-cluster-6A | SMUH00000000.1 | 1, 1, 1, 1, 5, 1, 1 | 1 | 1 |
Ab-Pak-Pesh-27 | blaOXA-69 | ampC-1 | Ab-Pak-cluster-4 | SMUI00000000.1 | 1, 1, 1, 1, 5, 1, 1 | 1 | 1 |
Ab-Pak-Pesh-28 | blaaOXA-65 | ampC-43 | Ab-Pak-cluster-7 | QQPZ00000000.1 | 41, 42, 13, 1, 5, 4, 14 | 158 | 158 |
Ab-Pak-Pesh-29 | blaOXA-69 | ISAba1, ampC-78 | Ab-Pak-cluster-5 | SMUJ00000000.1 | 1, 1, 1, 1, 5, 1, 1 | 1 | 1 |
Ab-Pak-Pesh-30 | blaOXA-69 | ampC-1 | Ab-Pak-cluster-4 | ND | – | – |  |
Ab-Pak-Pesh-31 | blaOXA-66 | ISAba1, ampC-20 | Ab-Pak-cluster-3 | QQQA00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-32 | blaOXA-66 | ISAba1, ampC-20 | Ab-Pak-cluster-3 | ND | – | – |  |
Ab-Pak-Pesh-33 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | QQQB00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-34 | blaOXA-66 | ISAba1, ampC-19 | Ab-Pak-cluster-1 | ND | – | – |  |
Ab-Pak-Pesh-35 | blaOXA-66 | ISAba1, ampC-2 | Ab-Pak-cluster-2 | ND | – | – |  |
Ab-Pak-Pesh-36 | blaOXA-66 | ISAba1, ampC-20 | Ab-Pak-cluster-3 | SMUK00000000.1 | 2, 2, 2, 2, 2, 2, 2 | 2 | 2 |
Ab-Pak-Pesh-37 | blaOXA-371 | ISAba1, ampC-8 | Ab-Pak-cluster-6B | QQQC00000000.1 | 2, 1, 2, 1, 5, 1, 1 | 1106 | 1 |