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Table 1 Drug resistance patterns and number of variants in the study samples

From: Application of next-generation sequencing to detect variants of drug-resistant Mycobacterium tuberculosis: genotype–phenotype correlation

Sample number

INH

RFP

SM

EMB

KM

AMK

OFLX

MXF

LFX

PZA

Number of variants

1

S

S

S

S

S

S

S

S

S

S

4

2

S

S

R

S

S

S

S

S

S

S

5

3

R

S

S

S

S

S

S

S

S

S

6

5

S

S

S

S

S

S

S

S

S

S

5

6

R

S

S

S

S

S

S

S

S

S

5

7

S

S

S

S

S

S

S

S

S

S

5

8

S

S

S

S

S

S

S

S

S

S

4

9

S

S

S

S

S

S

S

S

S

S

5

10

S

S

S

S

S

S

S

S

S

S

4

12

S

S

S

S

S

S

S

S

S

S

1

13

S

S

S

S

S

S

S

S

S

S

4

14

S

S

S

S

S

S

S

S

S

S

4

15

S

S

S

S

S

S

S

S

S

S

4

16

S

S

S

S

S

S

S

S

S

S

3

18

S

S

S

S

S

S

S

S

S

S

4

19

S

S

S

S

S

S

S

S

S

S

5

20

S

S

S

S

S

S

S

S

S

S

4

21

R

R

S

S

S

S

S

S

S

S

6

22

S

S

S

S

S

S

S

S

S

S

4

23

R

S

S

S

S

S

S

S

S

S

6

24

R

S

R

S

S

S

S

S

S

S

5

25

R

R

S

S

S

S

R

R

R

R

6

26

S

S

S

S

S

S

R

R

R

S

5

27

R

R

R

R

R

R

S

S

S

R

9

28

S

R

S

R

S

S

S

S

S

S

7

29

R

S

S

S

S

S

S

S

S

S

6

30

R

R

S

R

S

S

S

S

S

R

7

31

R

S

R

S

S

S

S

S

S

S

6

32

R

R

S

R

S

S

S

R

S

R

6

33

S

S

R

S

S

S

S

S

S

S

5

34

S

S

R

S

S

S

S

S

S

S

5

35

R

R

R

R

R

R

S

S

S

R

7

36

R

R

R

R

S

S

R

R

R

R

9

37

S

R

S

S

S

S

R

S

R

R

10

38

R

R

R

R

S

S

R

R

R

R

8

39

R

R

R

S

S

S

S

S

S

S

6

  1. R resistance, S susceptible, INH isoniazid, RFP rifampin, SM streptomycin, EMB ethambutol, KM kanamycin, AMK amikacin, OFLX ofloxacin, MXL moxifloxacin, LFX levofloxacin, PZA pyrazinamide