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Table 3 AMR analysis results from two different platform sequencing data sets

From: Identification of pathogens in culture-negative infective endocarditis cases by metagenomic analysis

Drug Platform Sample ID
A1 A2 A5 A7
Tetracycline BGI tetM tetM tetM
Nanopore tetM
Macrolide BGI ErmB,RlmA(II) ErmB,RlmA(II) ErmB
Nanopore ErmB ErmB
Lincosamide BGI ErmB,RlmA(II) ErmB,RlmA(II) ErmB
Nanopore ErmB ErmB
Streptogramin BGI ErmB ErmB ErmB
Nanopore ErmB ErmB
Fluoroquinolone BGI patB patB,pmrA
Nanopore
  1. – no results for this kind of drug