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TableĀ 2 Detail of the results for pathogen species identification from NGS (BGI) data

From: Identification of pathogens in culture-negative infective endocarditis cases by metagenomic analysis

Sample ID Pathogen species Genome size Reads num Unique reads num Relative abundance (%) Coverage (%) Depth
A1 Streptococcus gordonii 2,196,662 4465 4260 82.40 21.33 1.4380
A2 Streptococcus oralis 1,958,690 31,754 25,275 81.01 68.50 3.5609
A3 Coxiella burnetii 1,995,488 4014 3921 100.00 20.32 1.1890
A4 Bartonella quintana 1,581,384 29,676 29,438 99.55 77.68 2.9408
A5 Streptococcus oralis 1,958,690 68,435 54,881 81.74 75.74 6.8056
A6 Streptococcus sanguinis 2,388,435 380 370 86.20 2.33 1.0434
A7 Streptococcus anginosus 2,233,640 47,829 45,880 87.82 61.85 5.1198