From: Identification of pathogens in culture-negative infective endocarditis cases by metagenomic analysis
Case no | Diagnosis | Valve Gram staining | Blood culture | Valve culture | Nanopore | NGS | Sanger |
---|---|---|---|---|---|---|---|
A1 | Definite IEa | GPCb | Negative | Filamentous fungi c | S. gordonii | S. gordonii | S. gordonii |
A2 | Definite IEa | GPCb | Negative | Negative | S. oralis | S. oralis | S. viridans spp. |
A3 | Definite IEa | Negative | Negative | Negative | Coxiella burnetii | Coxiella burnetii | Not detected |
A4 | Definite IEa | Negative | Negative | Negative | Bartonella Quintana | Bartonella Quintana | Bartonella Quintana |
A5 | Definite IE | Negative | S. oralis | Negative | S. oralis | S. oralis | S. viridans spp. |
A6 | Definite IEa | GPCb | Negative | Negative | S. sanguis | S. sanguis | S. sanguis |
A7 | Definite IE | GPCb | S. anginosus | Negative | S. anginosus | S. anginosus | S. anginosus |