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Table 2 Primers used for the detection of carbapenemase genes.

From: Dissemination of multidrug resistant Acinetobacter baumannii in various hospitals of Antananarivo Madagascar

Name Sequence Use Experimental conditions Ref
AmpC 5'- ACTTACTTCAACTCGCGACG -3'
5'- TAAACACCACATATGTTCCG -3'
blaampC Amplification Classical PCR (annealing temperature 44°C) [18]
OXA-51 5'- ATGAACATTAAAGCACTCTTAC -3'
5'- CTATAAAATACCTAATTGTTCT -3'
blaOXA-51 Amplification Classical PCR (annealing temperature 50°C) [19]
OXA-23 5'- GCAAATAM AGAATATGTS CC -3'
5'- CTCM ACCCAR CCR GTCAACC -3'
blaOXA-23 Amplification & sequencing Classical PCR (annealing temperature 58°C) [20]
OXA-24 5'- GGTTAGTTGGCCCCCTTAAA -3'
5'- AGTTGAGCGAAAAGGGGATT -3'
blaOXA-24 Amplification Classical PCR (annealing temperature 59°C) [21]
VIM 5'- GTTTGGTCGCATATCGCAAC -3'
5'- CTACTCAACGACTGAGCGATTTGT -3'
blaVIM Amplification Classical PCR (annealing temperature 60°C) [13]
IMP 5'- CTACCGCAGCAGAGTCTTTG -3'
5'- AACCAGTTTTGCCTTACCAT -3'
blaIMP Classical PCR (annealing temperature 50°C) [13]
IsAba-1 F/OXA-23 R 5'- CACGAATGCAGAAGTTG - 3'
5'-TTAAATAATATTCAGCTGT - 3'
Regulation of OXA-23 by IsAba- 1 Classical PCR (annealing temperature 50°C) [22]
REP 5'-IIIGCGCCGICATCAGGC-3'
5'-ACGTCTTATCAGGCCTAC-3
REP-PCR Amplification Classical PCR (annealing temperature 40°C) [23]