From: Antimicrobial resistance in equine faecal Escherichia coli isolates from North West England
Primers sequences 5' to 3' | amplicon size (bp) |
---|---|
Shv: CACTCAAGGATGTATTGTG, TTAGCGTTGCCAGTGC | 885 |
Tem: TCGGGGAAATGTGCGCG, TGCTTAATCGTGAGGCACC | 971 |
CatI: AGTTGCTCAATGTACCTATAACC, TTGTAATTCATTAAGCATTCTGCC | 585 |
CatII: ACACTTTGCCCTTTATCGTC, TGAAAGCCATCACATACTGC | 495 |
CatIII: TTCGCCGTGAGCATTTTG, TCGGATGAGTATGGGCAAC | 508 |
cmlA: CCGCCACGGTGTTGTTGTTATC, CACCTTGCCTGCCCATCATTAG | 698 |
tet B: TTGGTTAGGGGCAAGTTTTG, GTAATGGGCCAATAACACCG | 659 |
tet C: CTTGAGAGCCTTCAACCCAG, ATGGTCCTCATCTACCTGCC | 418 |
tet D: AAACCATTACGGCATTCTGC, GACCGGATACACCATCCATC | 787 |
tet A: GCTACATCCTGCTTGCCTTC, CATAGATCGCCGTGAAGAGG | 210 |
tet E: AAACCACATCCTCCATACGC, AAATAGGCCACAACCGTCAG | 278 |
tetG: GCTCGGTGGTATCTCTGCTC, AGCAACAGAATCGGGAACAC | 210 |
dfr1: ACGGATCCTGGCTGTTGGTTGGACGC, CGGAATTCACCTTCCGGCTCGATGTC | 254 |
dfr9: ATGAATTCCCGTGGCATGAACCAGAAGAT, ATGGATCCTTCAGTAATGGTCGGGACCTC | 399 |
dfrA7, dfrA17: GTCGCCCTAAAACAAAGTTA, CGCCCATAGAGTCAAATGT | 195 |
dfr12, dfr13: CCGTGGGTCGATGTTTGATG, GCATTGGGAAGAAGGCGTTCAC | 485 |