Changes in the predominant human Lactobacillus flora during in vitro fertilisation

Jakobsson, Tell; Forsum, Urban

doi:10.1186/1476-0711-7-14

Annals of Clinical Microbiology and Antimicrobials

Table 1 List of reference strains used to group found signatures of 16s rDNA.

From: Changes in the predominant human Lactobacillus flora during in vitro fertilisation

Species	Strain	GenBank no	Reference	Reference 2
L. acidophilus ^a	ATCC4356^T	AY773947	Kao 2007	Falsen 1999
L. casei	ATCC334^T	NC008530	Makarova 2006	Falsen 1999
*L. crispatus*	KC12a	AF243152	Pavlova 2002
L. delbrueckii	ATCC9649^T	AY050172	Germond 03	Falsen1999
*L. fermentum*	KC5b(ATCC14931)	AF243166	Pavlova 202	Falsen 1999
L. gallinarum	ATCC3319^T	AJ242968	Ventura 2000	Falsen1999
*L. gasseri*	KC5a(ATCC33323)	AF243165	Pavlova 2002
*L. iners*	CCUG28746^T	Y16329	Falsen 1999	Falsen 1999
L. jensenii	ATCC25258^T	AF243176	Pavlova 2002	Falsen 1999
*L. jensenii*	KC36b	AF243159	Pavlova 2002
*L. jensenii*	KC23	AF243155	Pavlova 2002
L. johnsonii	ATCC33200^T	AJ002515	Fujisawa 1992	Falsen 1999
*L. mucosae*	BLB1c	AF243145	Pavlova 2002
*L. paracasei*	KLB58	AF243168	Pavlova 2002
L. reuteri	LU3(DSM20016)	AY735406	Unpubl	Falsen 1999
*L. rhamnosus*	F11(ATCC7469)	AF243146	Pavlova 2002
*L. vaginalis*	KC19	AF243154	Pavlova 2002
L. crispatus ^b	ATCC33820^T	AF257097	Pavlova 2002	Falsen 1999
L. kimchii	AP1077^T	AF 183558	Yoon 2000
L. paraalimentarius	TB1^T	AB018528	Cai 1999
L. paracasei	DSM5622^T	D79212	Mori 1997	Falsen 1999
L. vaginalis	ATCC49540^T	AF243177	Pavlova 2002	Falsen 1999
L. acidophilus	NCFM	NC006814	Altermann 2005
L. brevis	ATCC367^T	NC008497	Makarova 2006
L. delb. sp. bulgaricus	ATCC11842^T	NC008054	Van de Guchte 2006
L. gasseri	ATCC33323^T	NC008530	Makarova 2006
L. johnsonii	NCC533	NC005362	Pridemore 2004
L. plantarum	WCFS1	NC004567	Kleerebezem 2004
L. reuteri	F275	NC009513	unpublished
L. sak. sakei	23K	NC007576	Chaillou 2005
L. sal. salivarius	UCC118	NC007929	Claesson 2006

a/Selected reference strains (vaginal samples, in bold, chosen if existing)
b/Additional culture collection strains (of other than vaginal or no information as to origin) with sequences similar to the ones above and whole genome sequenced strains of lactobacilli.

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ISSN: 1476-0711

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