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Table 2 PCR and DNA primers sequencing of the three ESBL genetic markers

From: Detection of new SHV-12, SHV-5 and SHV-2a variants of extended spectrum Beta-lactamase in Klebsiella pneumoniae in Egypt

Primer

Sequence

Size (bp)

Reference

Core TEM F

CAGCGGTAAGATCCTTGAGA

643

[9]

Core TEM R

ACTCCCCGTCGTGTAGATAA

Core SHV F

GGCCGCGTAGGCATGATAGA

714

Core SHV R

CCCGGCGATTTGCTGATTTC

Core CTXM F

AACCGTCACGCTGTTGTTAG

766

Core CTXM R

TTGAGGCGTGGTGAAGTAAG

Upstream TEM F Upstream TEM R

TGAAGACGAAAGGGCCTCCTG ACTCCCCGTCGTGTAGATAA

109

Newly designed primers in GDDRP Molecular Laboratoryfor this study

Upstream SHV F Upstream SHV R

CGTTWTDTTCGCCKGTGT CGAGTAGTCCACCAGATCCTG

74

Upstream XTXM-F Upstream CXTXM-R

ATGGTTAAAAAATCACTG ACGTTATCGCTGTACTGTA

55

Downstream TEM F Downstream TEM R

CAGCGGTAAGATCCTTGAGA TAATCAGTGAGGCACCTATCTC

109

Downstream SHV F Downstream SHV R

GGCCGCGTAGGCATGATAGA CCCGGCGATTTGCTGATTTC

74

Downstream CTXM-F Downstream CTXM-R

TACAGTACAGCGATAACGTGG CCGTTTCCGCTATTACAAA

55