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Table 1 Major features of the 30 AGEs characterized in this study

From: Abundant diversity of accessory genetic elements and associated antimicrobial resistance genes in pseudomonas aeruginosa isolates from a single Chinese hospital

Isolate

Chromosome or plasmid

Transposon or AGE contained

Integron contained

Reference

Designation

Accession number

Classification

Designation

Classification

DHS01

cDHS01

CP013993

–

Tn6417

Tn6417-related ICEs

In159

[1]

NY11254

cNY11254

CP096960

–

Tn6586

In1820

This study

F291007

cF291007

CP081345

–

Tn7458*

In717

NY5523

cNY5523

CP096941

–

Tn7459*

In717 and In2144*

NY5532

cNY5532

CP096950

–

Tn7461*

In36

NY5530

cNY5530

CP096946

–

Tn7462*

In1815*

NY5507

cNY5507

CP096929

–

Tn7463*

In2044*

NY5520

cNY5520

CP096937

–

Tn7464*

In1836*

NY5510

cNY5510

CP096932

–

Tn7465*

In1818*

NY11210

cNY11210

CP096958

–

Tn7466*

In1979*

NY5511

cNY5511

CP096934

–

Tn7482*

In995

RPL11

pRPL11

AF313472

–

Tn1403

Tn1403-related transposons or derivatives

In28

[2]

NY13936

cNY13936

CP096964

–

Tn7483*

In1791

This study

NY5524

cNY5524

CP096942

–

Tn6846

In1079

NY5525

cNY5525

CP096945

–

Tn7484*

In458

NY5523

cNY5523

CP096941

–

Tn7485*

In51

NY5525

cNY5525

CP096945

–

T1403REcNY5525

In1829*

NY5532

cNY5532

CP096950

–

T1403REcNY5532

In44 and In167

SJTE-3

pRBL16

CP015879

IncpRBL16

–

–

–

[3]

NY5506

pNY5506-SIM

CP096928

T1403REpNY5506 − SIM

Tn1403-related derivatives

In56, In1809* and In1810*

This study

NY11173

pNY11173-DIM

CP096957

T1403REpNY11173 − DIM

In1980*, In1225 and In1226

NY5532

pNY5532-OXA

CP096951

T1403REpNY5532 − OXA

In1281

NY13932

pNY13932-PER

CP096963

T1403REpNY13932 − PER

In1281

60,512

p60512-IMP

MF344578

Incp60512−IMP&

Tn6394

ISPa17-based transposition units

In992

[4]

NY5535

pNY5535-IMP

CP096955

Tn7486*

In995

This study

NY5530

pNY5530-IMP

CP096949

Tn7487*

In1814*

NY5520

pNY5520-IMP

CP096938

Tn7488*

In1835*

NY5511

pNY5511-OXA

CP096935

Tn7494*

In1819*

PA7790

pPA7790

CP015000

IncpPA7790&

–

–

–

[5]

NY13932

pNY13932-OXA

CP096962

11.54-kb MDR region

–

In2151*

This study

  1. *, Newly identified; &, newly designated